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When creating MD RAID1 for a root fs and having no separate /boot, metadata 1.2 are used. But when having a separate RAID1 for /boot, anaconda automatically does it with older metadata. This is a particular problem for GRUB, because it can't boot from RAID1 with new metadata (v 0.9 metadata are the last that work I think). I filed a bug for GRUB, but I don't think they'll fix it (683421), so please take the need for older metadata in account even when having only one RAID1 with rootfs and no dedicated boot partition.
anaconda really, really should not care about MD metadata version.
Please attach /tmp/storage.log and /tmp/anaconda.log from the install. Post-install, they will be /var/log/anaconda.storage.log and /var/log/anaconda.log. Thanks.
I tested this scenario with anaconda-13.21.100-1 and was unable to reproduce. My tests showed that anaconda correctly recognized the situation and created the array with version 1.0 metadata, which is what we are supposed to do. We use version 1.1 for all other new arrays.