Description of problem: Following bug 712300, ROMIO support is broken on Fedora 15 versions and higher. This is due to a patch applied in the rpm spec file and followed by an autogen.sh, which does not generate configure files properly. Therefore a simple MPI_File_create no longer works. Version-Release number of selected component (if applicable): 1.5.x How reproducible: 100 % reproducible Steps to Reproduce: 1. Use a simple code which makes use of MPI_File_create 2. 3. Actual results: This can be seen in all the build logs from koji corresponding to 1.5.x versions: --- MCA component io:romio (m4 configuration macro) checking for MCA component io:romio compile mode... dso checking if want ROMIO component... yes checking if MPI profiling is enabled... yes *** Configuring ROMIO distribution configure: OMPI configuring in ompi/mca/io/romio/romio <...> setting USER_CFLAGS to setting USER_FFLAGS to configure: creating ./config.status config.status: error: cannot find input file: `Makefile.in' configure: /bin/sh './configure' *failed* for ompi/mca/io/romio/romio configure: WARNING: ROMIO distribution did not configure successfully checking if MCA component io:romio can compile... no Expected results: checking if MCA component io:romio can compile... yes Additional info:
I meant MPI_File_open actually (thinking at the same time at HDF5, sorry)
*** Bug 712300 has been marked as a duplicate of this bug. ***
Is it possible that someone looks into solving this bug? As it renders OpenMPI practically unusable (and thus hdf5 as well) this should be quite high on the priority list. Unfortunately I will not be able to help with the issue directly, but I'm happy to do some testing.
Is it possible to update from 1.5 to 1.5.4 in a stable release without building openmpi users? I'll have to do some testing.
It *should* be possible. One of the bullet points of openmpi-1.4 was that it was supposed to usher in a new era of compatible updates that didn't require recompiles all the time. Now, whether or not that is true....I can't speak to a 1.5.x to 1.5.x update, but I know from 1.4.x to 1.5.x requires a recompile and relink.
I was able to update to 1.5.4 on my rawhide machine without any complaints with lots of -openmpi packages installed. I also was able to launch a pvserver_openmpi process. More testing would be appreciated though. Any reason not to merge the changes to the f15/f16 branches and build some test packages?
Backport of rawhide openmpi to f15 resolves this.
openmpi-1.5.4-3.fc16 has been submitted as an update for Fedora 16. https://admin.fedoraproject.org/updates/openmpi-1.5.4-3.fc16
openmpi-1.5.4-3.fc15 has been submitted as an update for Fedora 15. https://admin.fedoraproject.org/updates/openmpi-1.5.4-3.fc15
Package openmpi-1.5.4-3.fc15: * should fix your issue, * was pushed to the Fedora 15 testing repository, * should be available at your local mirror within two days. Update it with: # su -c 'yum update --enablerepo=updates-testing openmpi-1.5.4-3.fc15' as soon as you are able to. Please go to the following url: https://admin.fedoraproject.org/updates/FEDORA-2012-0725/openmpi-1.5.4-3.fc15 then log in and leave karma (feedback).
openmpi-1.5.4-3.fc16 has been pushed to the Fedora 16 stable repository. If problems still persist, please make note of it in this bug report.
openmpi-1.5.4-3.fc15 has been pushed to the Fedora 15 stable repository. If problems still persist, please make note of it in this bug report.