Bug 911492 - [abrt] rlwrap-0.37-4.fc18: suicide_by: Process /usr/bin/rlwrap was killed by signal 6 (SIGABRT)
Summary: [abrt] rlwrap-0.37-4.fc18: suicide_by: Process /usr/bin/rlwrap was killed by ...
Keywords:
Status: CLOSED WONTFIX
Alias: None
Product: Fedora
Classification: Fedora
Component: rlwrap
Version: 18
Hardware: x86_64
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: Michel Lind
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard: abrt_hash:c153fed04216461dd3443fdb538...
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2013-02-15 07:48 UTC by Ritchie J Latimore
Modified: 2014-02-05 19:11 UTC (History)
3 users (show)

Fixed In Version:
Doc Type: Bug Fix
Doc Text:
Clone Of:
Environment:
Last Closed: 2014-02-05 19:11:14 UTC
Type: ---
Embargoed:


Attachments (Terms of Use)
File: backtrace (3.46 KB, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: cgroup (131 bytes, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: core_backtrace (453 bytes, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: dso_list (839 bytes, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: environ (2.95 KB, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: limits (1.29 KB, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: maps (3.98 KB, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: open_fds (174 bytes, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: proc_pid_status (920 bytes, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details
File: var_log_messages (228 bytes, text/plain)
2013-02-15 07:48 UTC, Ritchie J Latimore
no flags Details

Description Ritchie J Latimore 2013-02-15 07:48:13 UTC
Version-Release number of selected component:
rlwrap-0.37-4.fc18

Additional info:
backtrace_rating: 4
cmdline:        rlwrap -r -m -q '\'\"\'' -b '\"(){}[],^%2@\";:\'\"' java -Xbootclasspath/a:/usr/share/java/clojure-compat.jar -client -XX:+TieredCompilation -Dleiningen.original.pwd=/home/rijalati/git -Dleiningen.trampoline-file=/tmp/lein-trampoline-3744 -cp :::::test/:src/:resources/:/usr/share/java/ant.jar:/usr/share/java/ant-launcher.jar:/usr/share/java/classworlds.jar:/usr/share/java/clojure-compat.jar:/usr/share/java/clojure-contrib.jar:/usr/share/java/clucy.jar:/usr/share/java/lancet.jar:/usr/share/java/lucene-core.jar:/usr/share/java/lucene-contrib/lucene-highlighter.jar:/usr/share/java/lucene-contrib/lucene-memory.jar:/usr/share/java/maven-ant-tasks.jar:/usr/share/java/maven/maven-artifact-2.2.1.jar:/usr/share/java/maven/maven-artifact-manager.jar:/usr/share/java/maven/maven-error-diagnostics.jar:/usr/share/java/maven/maven-model-2.2.1.jar:/usr/share/java/maven/maven-project.jar:/usr/share/java/maven/maven-profile.jar:/usr/share/java/maven/maven-repository-metadata.jar:/usr/share/java/maven/maven-settings-2.2.1.jar:/usr/share/java/maven-wagon/file.jar:/usr/share/java/maven-wagon/http-shared.jar:/usr/share/java/maven-wagon/http-lightweight.jar:/usr/share/java/maven-wagon/provider-api.jar:/usr/share/java/plexus/container-default.jar:/usr/share/java/plexus/interpolation.jar:/usr/share/java/plexus/utils.jar:/usr/share/java/robert-hooke.jar:/usr/share/java/xml-commons-apis.jar:/usr/share/java/backport-util-concurrent.jar:/usr/share/java/leiningen.jar clojure.main -e '(use \'leiningen.core)(-main)' /dev/null install lein-cljsbuild
crash_function: suicide_by
executable:     /usr/bin/rlwrap
kernel:         3.7.6-201.fc18.x86_64
remote_result:  NOTFOUND
uid:            1000

Truncated backtrace:
[New LWP 3768]
Core was generated by `rlwrap -r -m -q '"' -b "(){}[],^%2@";:'" java -Xbootclasspath/a:/usr/share/java'.
Program terminated with signal 6, Aborted.
#0  0x0000003131035e87 in kill () at ../sysdeps/unix/syscall-template.S:81
81	T_PSEUDO (SYSCALL_SYMBOL, SYSCALL_NAME, SYSCALL_NARGS)

Thread 1 (LWP 3768):
#0  0x0000003131035e87 in kill () at ../sysdeps/unix/syscall-template.S:81
No locals.
#1  0x000000000040523a in suicide_by (signal=6, status=<optimized out>) at signals.c:429
No locals.
#2  0x0000000000403f60 in cleanup_rlwrap_and_exit (status=status@entry=0) at main.c:979
        commands_killer = <optimized out>
#3  0x000000000040440f in main_loop () at main.c:317
        nfds = 0
        readfds = {fds_bits = {0 <repeats 16 times>}}
        writefds = {fds_bits = {0 <repeats 16 times>}}
        nread = <optimized out>
        buf = ' ' <repeats 15 times>, "/opt/ibm/java-x86_64-70/jre/lib/amd64/libjava.so\r\n7f5d23274000-7f5d23276000 rw-p 00024000 fd:01 4056969", ' ' <repeats 20 times>, "/opt/ibm/java-x86_64-70/jre/lib/amd64/libjava.so\r\n7f5d23276000-7f5d23277000 ---"...
        old_raw_prompt = 0x3131003cd8 ""
        new_output_minus_prompt = <optimized out>
        leave_prompt_alone = <optimized out>
        no_signals_blocked = {__val = {0 <repeats 16 times>}}
        select_timeout = {tv_sec = 0, tv_nsec = 0}
        select_timeoutptr = <optimized out>
        immediately = {tv_sec = 0, tv_nsec = 0}
        wait_a_little = {tv_sec = 0, tv_nsec = 40000000}
#4  0x00000000004038ac in main (argc=<optimized out>, argv=0x7fffa4fc4e98) at main.c:167
No locals.
From                To                  Syms Read   Shared Object Library
0x0000003138400f10  0x0000003138401824  Yes         /lib64/libutil.so.1
0x0000003133014f50  0x00000031330339a8  Yes         /lib64/libreadline.so.6
0x0000003143c06d30  0x0000003143c1da98  Yes         /lib64/libncurses.so.5
0x000000314340cdd0  0x0000003143418c68  Yes         /lib64/libtinfo.so.5
0x000000313101f1a0  0x0000003131160940  Yes         /lib64/libc.so.6
0x0000003131400ed0  0x00000031314019f0  Yes         /lib64/libdl.so.2
0x0000003130c00b20  0x0000003130c1a3d9  Yes         /lib64/ld-linux-x86-64.so.2
0x00007f11a558e1e0  0x00007f11a559567c  Yes         /lib64/libnss_files.so.2
$1 = 0x0
No symbol "__glib_assert_msg" in current context.
rax            0x0	0
rbx            0x64	100
rcx            0xffffffffffffffff	-1
rdx            0x0	0
rsi            0x6	6
rdi            0xeb8	3768
rbp            0x6	0x6
rsp            0x7fffa4fc4938	0x7fffa4fc4938
r8             0x0	0
r9             0x5b	91
r10            0x7fffa4fc46d0	140735961384656
r11            0x202	514
r12            0x40d0d6	4247766
r13            0x18c0030	25952304
r14            0x0	0
r15            0x0	0
rip            0x3131035e87	0x3131035e87 <kill+7>
eflags         0x202	[ IF ]
cs             0x33	51
ss             0x2b	43
ds             0x0	0
es             0x0	0
fs             0x0	0
gs             0x0	0
Dump of assembler code for function kill:
   0x0000003131035e80 <+0>:	mov    $0x3e,%eax
   0x0000003131035e85 <+5>:	syscall 
=> 0x0000003131035e87 <+7>:	cmp    $0xfffffffffffff001,%rax
   0x0000003131035e8d <+13>:	jae    0x3131035e90 <kill+16>
   0x0000003131035e8f <+15>:	retq   
   0x0000003131035e90 <+16>:	mov    0x37afa1(%rip),%rcx        # 0x31313b0e38
   0x0000003131035e97 <+23>:	neg    %eax
   0x0000003131035e99 <+25>:	mov    %eax,%fs:(%rcx)
   0x0000003131035e9c <+28>:	or     $0xffffffffffffffff,%rax
   0x0000003131035ea0 <+32>:	retq   
End of assembler dump.

Comment 1 Ritchie J Latimore 2013-02-15 07:48:18 UTC
Created attachment 697576 [details]
File: backtrace

Comment 2 Ritchie J Latimore 2013-02-15 07:48:19 UTC
Created attachment 697577 [details]
File: cgroup

Comment 3 Ritchie J Latimore 2013-02-15 07:48:21 UTC
Created attachment 697578 [details]
File: core_backtrace

Comment 4 Ritchie J Latimore 2013-02-15 07:48:23 UTC
Created attachment 697579 [details]
File: dso_list

Comment 5 Ritchie J Latimore 2013-02-15 07:48:24 UTC
Created attachment 697580 [details]
File: environ

Comment 6 Ritchie J Latimore 2013-02-15 07:48:26 UTC
Created attachment 697581 [details]
File: limits

Comment 7 Ritchie J Latimore 2013-02-15 07:48:28 UTC
Created attachment 697582 [details]
File: maps

Comment 8 Ritchie J Latimore 2013-02-15 07:48:29 UTC
Created attachment 697583 [details]
File: open_fds

Comment 9 Ritchie J Latimore 2013-02-15 07:48:31 UTC
Created attachment 697584 [details]
File: proc_pid_status

Comment 10 Ritchie J Latimore 2013-02-15 07:48:33 UTC
Created attachment 697585 [details]
File: var_log_messages

Comment 11 Morteza 2013-02-20 10:19:43 UTC
I tried to run VMD (a visualizer). but I get this error:
" rlwrap: warning: vmd killed by SIGSEGV (core dumped).
rlwrap has not crashed, but for transparency,
it will now kill itself with the same signal

Segmentation fault (core dumped) "
Prior to an update (with testing repos enabled) VMD has no problem.

backtrace_rating: 4
cmdline:        rlwrap -C vmd -c '-b()[],&^%#;|\\\\' -f /usr/local/lib/vmd/vmd_completion.dat /usr/local/lib/vmd/vmd_LINUXAMD64 dump.xyz
crash_function: suicide_by
executable:     /usr/bin/rlwrap
kernel:         3.7.6-201.fc18.x86_64
package:        rlwrap-0.37-4.fc18
reason:         Process /usr/bin/rlwrap was killed by signal 11 (SIGSEGV)
remote_result:  NOTFOUND
uid:            1000

Comment 12 Thomas Spura 2013-11-21 10:10:10 UTC
(In reply to Morteza from comment #11)
> I tried to run VMD (a visualizer). but I get this error:
> " rlwrap: warning: vmd killed by SIGSEGV (core dumped).
> rlwrap has not crashed, but for transparency,
> it will now kill itself with the same signal
> 
> Segmentation fault (core dumped) "
> Prior to an update (with testing repos enabled) VMD has no problem.
> 
> backtrace_rating: 4
> cmdline:        rlwrap -C vmd -c '-b()[],&^%#;|\\\\' -f
> /usr/local/lib/vmd/vmd_completion.dat /usr/local/lib/vmd/vmd_LINUXAMD64
> dump.xyz
> crash_function: suicide_by
> executable:     /usr/bin/rlwrap
> kernel:         3.7.6-201.fc18.x86_64
> package:        rlwrap-0.37-4.fc18
> reason:         Process /usr/bin/rlwrap was killed by signal 11 (SIGSEGV)
> remote_result:  NOTFOUND
> uid:            1000

Quite similar here...

Comment 13 Thomas Spura 2013-11-21 10:18:08 UTC
When running plain vmd in gdb (without rlwrap around it), it crashes as:
#0  0x00000000005b8a82 in vmd_gridsearch1(float const*, int, int const*, float, int, int) ()
No symbol table info available.
#1  0x000000000050b962 in DrawMolItem::draw_dynamic_bonds(float*, float, int, float) ()
No symbol table info available.
#2  0x00000000005160c9 in DrawMolItem::do_create_cmdlist() ()
No symbol table info available.
#3  0x000000000051648b in DrawMolItem::create_cmdlist() ()
No symbol table info available.
#4  0x000000000050320c in Displayable::draw_prepare() ()

It seems rlwrap cannot stand a crashing vmd?

Comment 14 Fedora End Of Life 2013-12-21 11:25:14 UTC
This message is a reminder that Fedora 18 is nearing its end of life.
Approximately 4 (four) weeks from now Fedora will stop maintaining
and issuing updates for Fedora 18. It is Fedora's policy to close all
bug reports from releases that are no longer maintained. At that time
this bug will be closed as WONTFIX if it remains open with a Fedora 
'version' of '18'.

Package Maintainer: If you wish for this bug to remain open because you
plan to fix it in a currently maintained version, simply change the 'version' 
to a later Fedora version prior to Fedora 18's end of life.

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Although we aim to fix as many bugs as possible during every release's 
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Comment 15 Fedora End Of Life 2014-02-05 19:11:14 UTC
Fedora 18 changed to end-of-life (EOL) status on 2014-01-14. Fedora 18 is
no longer maintained, which means that it will not receive any further
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