Bug 958836 - Transparency rendering problems on PyMOL
Summary: Transparency rendering problems on PyMOL
Keywords:
Status: CLOSED EOL
Alias: None
Product: Fedora
Classification: Fedora
Component: xorg-x11-drv-ati
Version: 19
Hardware: x86_64
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: X/OpenGL Maintenance List
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On: 860660
Blocks: 958832
TreeView+ depends on / blocked
 
Reported: 2013-05-02 13:51 UTC by Michal Domonkos
Modified: 2015-02-17 15:08 UTC (History)
2 users (show)

Fixed In Version:
Doc Type: Bug Fix
Doc Text:
Clone Of: 860660
Environment:
Last Closed: 2015-02-17 15:08:20 UTC
Type: Bug
Embargoed:


Attachments (Terms of Use)

Description Michal Domonkos 2013-05-02 13:51:48 UTC
+++ This bug was initially created as a clone of Bug #860660 +++

Description of problem:
Wizard -> Demo -> Transparency does not show the internal atoms and bonds over the transparent hull.

Versions:
- Radeon testday LiveCD
- Pymol 1.5.0.2-5.20120218svn3982.fc18 (installed using yum)
- xorg-x11-drv-ati-7.0.0-0.6.20120910git7c7f27756
- kernel 3.6.0-0.rc7.git0.1

Hardware profile: http://www.smolts.org/client/show/pub_d6c0fd9b-0118-42ca-8d14-199f3029fc97

Steps to Reproduce:
1. Launch PyMOL
2. Load transparency demo using Wizard menu Demo entry
3. Objects inside the transparent molecule hull are not shown
  
Actual results:
- Check attached png
Expected results:
- Check attached png generated on a F17 system over the same hardware, both 64 bits installations (PyMOL on F17 is 1.5.0.2-3.20120218svn3982.fc17, which is not exactly the same package version [3 on F17 vs 5 on F18]

--- Additional comment from Jacobo Cabaleiro on 2012-09-26 08:24:17 EDT ---

Created attachment 617532 [details]
PyMOL correct transparency demo on F17

--- Additional comment from Jacobo Cabaleiro on 2012-09-26 08:24:54 EDT ---

Created attachment 617533 [details]
PyMOL no transparency on F18 radeon testday LiveCD

Comment 1 Michal Domonkos 2013-05-02 13:52:34 UTC
Still present in Fedora 19.

xorg-x11-server-Xorg-1.14.0-6.fc19.x86_64
xorg-x11-drv-ati-7.1.0-5.20130408git6e74aacc5.fc19.x86_64
kernel-3.9.0-0.rc8.git0.2.fc19.x86_64

Comment 2 Fedora End Of Life 2015-01-09 18:01:36 UTC
This message is a notice that Fedora 19 is now at end of life. Fedora 
has stopped maintaining and issuing updates for Fedora 19. It is 
Fedora's policy to close all bug reports from releases that are no 
longer maintained. Approximately 4 (four) weeks from now this bug will
be closed as EOL if it remains open with a Fedora 'version' of '19'.

Package Maintainer: If you wish for this bug to remain open because you
plan to fix it in a currently maintained version, simply change the 'version' 
to a later Fedora version.

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Although we aim to fix as many bugs as possible during every release's 
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Comment 3 Fedora End Of Life 2015-02-17 15:08:20 UTC
Fedora 19 changed to end-of-life (EOL) status on 2015-01-06. Fedora 19 is
no longer maintained, which means that it will not receive any further
security or bug fix updates. As a result we are closing this bug.

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