Bug 2220406

Summary:	F39FailsToInstall: python3-pingouin
Product:	[Fedora] Fedora	Reporter:	Fedora Fails To Install <fti-bugs>
Component:	python-pingouin	Assignee:	Ankur Sinha (FranciscoD) <sanjay.ankur>
Status:	CLOSED ERRATA	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	unspecified	Docs Contact:
Priority:	unspecified
Version:	rawhide	CC:	gui1ty, neuro-sig, sanjay.ankur
Target Milestone:	---
Target Release:	---
Hardware:	Unspecified
OS:	Unspecified
Whiteboard:
Fixed In Version:	python-pingouin-0.5.3-5.fc39	Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2023-07-29 16:18:03 UTC	Type:	---
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:
Bug Depends On:	2220392, 2220567
Bug Blocks:	2135404, 2168845

Description Fedora Fails To Install 2023-07-05 19:17:51 UTC

Hello,

Please note that this comment was generated automatically by https://pagure.io/releng/blob/main/f/scripts/ftbfs-fti/follow-policy.py
If you feel that this output has mistakes, please open an issue at https://pagure.io/releng/

Your package (python-pingouin) Fails To Install in Fedora 39:

can't install python3-pingouin:
  - nothing provides python3.11dist(pandas) >= 1 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(matplotlib) >= 3.0.2 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(scipy) >= 1.7 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(seaborn) >= 0.11 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(statsmodels) >= 0.13 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(scikit-learn) needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(tabulate) needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(outdated) needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python(abi) = 3.11 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(numpy) >= 1.19 needed by python3-pingouin-0.5.3-3.fc39.noarch
  
If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem.


If you don't react accordingly to the policy for FTBFS/FTI bugs (https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/), your package may be orphaned in 8+ weeks.


P.S. The data was generated solely from koji buildroot, so it might be newer than the latest compose or the content on mirrors. To reproduce, use the koji/local repo only, e.g. in mock:

    $ mock -r fedora-39-x86_64 --config-opts mirrored=False install python3-pingouin


P.P.S. If this bug has been reported in the middle of upgrading multiple dependent packages, please consider using side tags: https://docs.fedoraproject.org/en-US/fesco/Updates_Policy/#updating-inter-dependent-packages

Thanks!

Comment 1 Ankur Sinha (FranciscoD) 2023-07-06 11:30:15 UTC

Currently FTBFS:

Error: 
 Problem: package python3-pandas-flavor-0.5.0-1.fc39.noarch from fedora requires python(abi) = 3.11, but none of the providers can be installed
  - package python3-devel-3.12.0~b3-2.fc39.x86_64 from @System conflicts with python3 < 3.12.0~b3-2.fc39 provided by python3-3.11.4-1.fc39.i686 from fedora
  - package python3-devel-3.12.0~b3-2.fc39.x86_64 from @System conflicts with python3 < 3.12.0~b3-2.fc39 provided by python3-3.11.4-1.fc39.x86_64 from fedora
  - cannot install the best candidate for the job
(try to add '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)

Comment 2 Sandro 2023-07-21 23:35:35 UTC

=========================== short test summary info ============================
FAILED pingouin/tests/test_correlation.py::TestCorrelation::test_partial_corr
FAILED pingouin/tests/test_pairwise.py::TestPairwise::test_pairwise_corr - As...
!!!!!!!!!!!!!!!!!!!!!!!!!! stopping after 2 failures !!!!!!!!!!!!!!!!!!!!!!!!!!!
============ 2 failed, 48 passed, 67 warnings in 104.09s (0:01:44) =============

Comment 3 Sandro 2023-07-26 12:31:45 UTC

Reported upstream. Tests pass using Python3.11. Probably some deprecated stuff that got removed in Python 3.12.

Comment 4 Sandro 2023-07-29 15:11:28 UTC

Upstream supplied a patch, which I applied. Package is building fine now.

Comment 5 Fedora Update System 2023-07-29 16:15:05 UTC

FEDORA-2023-31e1b0cfdd has been submitted as an update to Fedora 39. https://bodhi.fedoraproject.org/updates/FEDORA-2023-31e1b0cfdd

Comment 6 Fedora Update System 2023-07-29 16:18:03 UTC

FEDORA-2023-31e1b0cfdd has been pushed to the Fedora 39 stable repository.
If problem still persists, please make note of it in this bug report.