Bug 2220406 - F39FailsToInstall: python3-pingouin
Summary: F39FailsToInstall: python3-pingouin
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora
Classification: Fedora
Component: python-pingouin
Version: rawhide
Hardware: Unspecified
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: Ankur Sinha (FranciscoD)
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On: 2220392 2220567
Blocks: PYTHON3.12 F39FailsToInstall
TreeView+ depends on / blocked
 
Reported: 2023-07-05 19:17 UTC by Fedora Fails To Install
Modified: 2023-07-29 16:18 UTC (History)
3 users (show)

Fixed In Version: python-pingouin-0.5.3-5.fc39
Clone Of:
Environment:
Last Closed: 2023-07-29 16:18:03 UTC
Type: ---
Embargoed:


Attachments (Terms of Use)


Links
System ID Private Priority Status Summary Last Updated
Fedora Package Sources python-pingouin pull-request 6 0 None None None 2023-07-29 15:11:27 UTC
Github raphaelvallat pingouin issues 369 0 None open Python3.12: Two tests are failing with AssertionError 2023-07-26 12:31:44 UTC

Description Fedora Fails To Install 2023-07-05 19:17:51 UTC
Hello,

Please note that this comment was generated automatically by https://pagure.io/releng/blob/main/f/scripts/ftbfs-fti/follow-policy.py
If you feel that this output has mistakes, please open an issue at https://pagure.io/releng/

Your package (python-pingouin) Fails To Install in Fedora 39:

can't install python3-pingouin:
  - nothing provides python3.11dist(pandas) >= 1 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(matplotlib) >= 3.0.2 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(scipy) >= 1.7 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(seaborn) >= 0.11 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(statsmodels) >= 0.13 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(scikit-learn) needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(tabulate) needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(outdated) needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python(abi) = 3.11 needed by python3-pingouin-0.5.3-3.fc39.noarch
  - nothing provides python3.11dist(numpy) >= 1.19 needed by python3-pingouin-0.5.3-3.fc39.noarch
  
If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem.


If you don't react accordingly to the policy for FTBFS/FTI bugs (https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/), your package may be orphaned in 8+ weeks.


P.S. The data was generated solely from koji buildroot, so it might be newer than the latest compose or the content on mirrors. To reproduce, use the koji/local repo only, e.g. in mock:

    $ mock -r fedora-39-x86_64 --config-opts mirrored=False install python3-pingouin


P.P.S. If this bug has been reported in the middle of upgrading multiple dependent packages, please consider using side tags: https://docs.fedoraproject.org/en-US/fesco/Updates_Policy/#updating-inter-dependent-packages

Thanks!

Comment 1 Ankur Sinha (FranciscoD) 2023-07-06 11:30:15 UTC
Currently FTBFS:

Error: 
 Problem: package python3-pandas-flavor-0.5.0-1.fc39.noarch from fedora requires python(abi) = 3.11, but none of the providers can be installed
  - package python3-devel-3.12.0~b3-2.fc39.x86_64 from @System conflicts with python3 < 3.12.0~b3-2.fc39 provided by python3-3.11.4-1.fc39.i686 from fedora
  - package python3-devel-3.12.0~b3-2.fc39.x86_64 from @System conflicts with python3 < 3.12.0~b3-2.fc39 provided by python3-3.11.4-1.fc39.x86_64 from fedora
  - cannot install the best candidate for the job
(try to add '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)

Comment 2 Sandro 2023-07-21 23:35:35 UTC
=========================== short test summary info ============================
FAILED pingouin/tests/test_correlation.py::TestCorrelation::test_partial_corr
FAILED pingouin/tests/test_pairwise.py::TestPairwise::test_pairwise_corr - As...
!!!!!!!!!!!!!!!!!!!!!!!!!! stopping after 2 failures !!!!!!!!!!!!!!!!!!!!!!!!!!!
============ 2 failed, 48 passed, 67 warnings in 104.09s (0:01:44) =============

Comment 3 Sandro 2023-07-26 12:31:45 UTC
Reported upstream. Tests pass using Python3.11. Probably some deprecated stuff that got removed in Python 3.12.

Comment 4 Sandro 2023-07-29 15:11:28 UTC
Upstream supplied a patch, which I applied. Package is building fine now.

Comment 5 Fedora Update System 2023-07-29 16:15:05 UTC
FEDORA-2023-31e1b0cfdd has been submitted as an update to Fedora 39. https://bodhi.fedoraproject.org/updates/FEDORA-2023-31e1b0cfdd

Comment 6 Fedora Update System 2023-07-29 16:18:03 UTC
FEDORA-2023-31e1b0cfdd has been pushed to the Fedora 39 stable repository.
If problem still persists, please make note of it in this bug report.


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