Bug 1288804 - (python-pysegbase) Review Request: python-pysegbase - 3D graph cut segmentation
Review Request: python-pysegbase - 3D graph cut segmentation
Status: CLOSED DEFERRED
Product: Fedora
Classification: Fedora
Component: Package Review (Show other bugs)
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medium Severity medium
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Assigned To: Julien Enselme
Fedora Extras Quality Assurance
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Depends On: python-pydicom python-pygco
Blocks: fedora-neuro
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Reported: 2015-12-05 22:10 EST by Igor Gnatenko
Modified: 2016-04-14 10:13 EDT (History)
4 users (show)

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Doc Type: Bug Fix
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Last Closed: 2016-01-09 10:22:15 EST
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Description Igor Gnatenko 2015-12-05 22:10:38 EST
Spec URL: https://ignatenkobrain.fedorapeople.org/neurofedora/python-pysegbase.spec
SRPM URL: https://ignatenkobrain.fedorapeople.org/neurofedora/python-pysegbase-1.1.2-1.fc24.src.rpm
Description: Segmentation tools based on the graph cut algorithm.
Fedora Account System Username: ignatenkobrain
Comment 1 Zbigniew Jędrzejewski-Szmek 2015-12-08 17:23:56 EST
This looks like another fatality of gco...
Comment 2 Julien Enselme 2016-01-09 08:29:18 EST
While building you package in mock, I encountered the following error:
No matching package to install: 'python2-pygco'
No matching package to install: 'python3-pygco'


I think your package requires https://pypi.python.org/pypi/pygco/0.0.5 which is not packaged in fedora yet. Can you please solve this? You can assign me to the review if you want.
Comment 3 Zbigniew Jędrzejewski-Szmek 2016-01-09 09:44:40 EST
It's usually helpful to read older comments...
Comment 4 Julien Enselme 2016-01-09 10:14:48 EST
> It's usually helpful to read older comments...

OK, just read the closed deps. From what I understand, this review should be closed as CANTFIX, no?
Comment 5 Zbigniew Jędrzejewski-Szmek 2016-01-09 10:16:23 EST
I thought so, but I don't know enough about the codebase to decide if gco dependency is mandatory, or can maybe replaced by something else, etc.
Comment 6 Julien Enselme 2016-01-09 10:22:15 EST
> I don't know enough about the codebase to decide if gco dependency is mandatory, or can maybe replaced by something else, etc.

In that case, I think you should see with the developers of pysegbase. For now, I am closing this review as DEFERRED. Feel free to reopen it once the dependency problem is solved.
Comment 7 Miroslav Jirik 2016-04-14 10:05:05 EDT
Hi, I am the author of pysegbase. I want to confirm that pygco is indeed required to run pysegbase.

pygco package can be installed from pypi with:

pip install pygco

Unfortunately there is no rpm package. :-(
Comment 8 Igor Gnatenko 2016-04-14 10:13:15 EDT
(In reply to Miroslav Jirik from comment #7)
> Hi, I am the author of pysegbase. I want to confirm that pygco is indeed
> required to run pysegbase.
> 
> pygco package can be installed from pypi with:
> 
> pip install pygco
> 
> Unfortunately there is no rpm package. :-(

problem with gco itself. Read https://bugzilla.redhat.com/show_bug.cgi?id=1288766

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