Pcre has been deprecated since Fedora 38. Please consider porting to the new pcre2 version. Fedora change that describes the pcre deprecation is located here: https://fedoraproject.org/wiki/PcreDeprecation FESCo approval is located here: https://pagure.io/fesco/issue/2862 If your component has already ported to pcre2 or you don't Require/BuildRequire any pcre subpackage, feel free to close this Bugzilla. This Bugzilla was created automatically and some issues might have occurred along the way.
Adding blocking relationship to BZ 2127507 (the Change tracker)
Ported to pcre2 in EMBOSS-6.6.0-22.fc38
With the EMBOSS-6.6.0-pcre2.patch included we get most (all?) EMBOSS programs producing a Segmentation fault (core dumped). During the build I see the following warnings: ajreg.c:157:81: warning: passing argument 4 of 'pcre2_compile_8' from incompatible pointer type [-Wincompatible-pointer-types] ret->pcre = pcre2_compile((PCRE2_SPTR)rexp, PCRE2_ZERO_TERMINATED, options, &errptr, &errpos, tableptr); ^~~~~~~ In file included from ajreg.h:46, from ajreg.c:34: /usr/include/pcre2.h:916:1: note: expected 'int *' but argument is of type 'const char **' PCRE2_TYPES_STRUCTURES_AND_FUNCTIONS ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ajreg.c:157:90: warning: passing argument 5 of 'pcre2_compile_8' from incompatible pointer type [-Wincompatible-pointer-types] ret->pcre = pcre2_compile((PCRE2_SPTR)rexp, PCRE2_ZERO_TERMINATED, options, &errptr, &errpos, tableptr); ^~~~~~~ In file included from ajreg.h:46, from ajreg.c:34: /usr/include/pcre2.h:916:1: note: expected 'size_t *' {aka 'long unsigned int *'} but argument is of type 'int *' PCRE2_TYPES_STRUCTURES_AND_FUNCTIONS Would it be possible for this be looked at again? We're happy to run without the patch here for now...
The crash was also failed as bug 2242051. GCC 14 will refuse to build EMBOSS because of related type errors.
FEDORA-2023-4583e503b9 has been submitted as an update to Fedora 38. https://bodhi.fedoraproject.org/updates/FEDORA-2023-4583e503b9
FEDORA-2023-f5e1cc77de has been submitted as an update to Fedora 39. https://bodhi.fedoraproject.org/updates/FEDORA-2023-f5e1cc77de
FEDORA-2023-4583e503b9 has been pushed to the Fedora 38 testing repository. Soon you'll be able to install the update with the following command: `sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-4583e503b9` You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-4583e503b9 See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.
FEDORA-2023-f5e1cc77de has been pushed to the Fedora 39 testing repository. Soon you'll be able to install the update with the following command: `sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-f5e1cc77de` You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-f5e1cc77de See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.
FEDORA-2023-4583e503b9 has been pushed to the Fedora 38 stable repository. If problem still persists, please make note of it in this bug report.
FEDORA-2023-f5e1cc77de has been pushed to the Fedora 39 stable repository. If problem still persists, please make note of it in this bug report.