Created attachment 319605 [details] 'crash dump' automatically saved, as per the dialog box appearing upon failure Description of problem: . Version-Release number of selected component (if applicable): How reproducible: Completely Steps to Reproduce: 1. When 'automatic' update notice appears, enter the root password and wait. 2. 3. Actual results: When 'Resolving dependencies for updates' completes (but before the 'Resolving...' status box disappears), an alert is presented with the following text: 'An unhandled exception has occurred. This is most likely a bug. Please save the crash dump and file a detailed bug report against pirut at https://bugzilla.redhat.com/bugzilla' Save the file by clicking the appropriate dialog button. See attached file (saved per the instructions) Expected results: 'Resolving dependencies for updates' disappears, and is followed by 'Installing updates' Additional info:
On further observation, this bug only occurs on the 'kernel' update (of a list of updates which were offered at the same time). The detailed description of the 'kernel' update is as follows: Title kernel-2.6.26.5-28.fc8 ID FEDORA-2008-8312 Type bugfix Status stable Issued 2008-10-01 06:01:13 Description Update kernel from version 2.6.26.3 to 2.6.26.5: http://www.kernel.org/pub/linux/kernel/v2.6/ChangeLog-2.6.26.4 http://www.kernel.org/pub/linux/kernel/v2.6/ChangeLog-2.6.26.5 Plus additional patches scheduled for inclusion in 2.6.26.6. Bugs fixed (all reported against Fedora 9): 453023 - e1000/e1000e driver doesn't work with gigabit connection 459103 - kexec/kdump panics on HP Proliant 462375 - 2.6.26.3-29.fc9.i686: stacktrace on usb disk plug in 453257 - Seemingly non-working process is messing with process scheduler. 461438 - Intel Corporation 82567LM Gigabit Network device not working 455833 - Marvell 88SE6121 PATA not recognized correctly 462210 - Macbook Pro stuck on kernel load This update will require a reboot.
The kernel update isn't the problem, I don't think. Can you run: yum --version yum repolist ls -l /var/cache/yum/* ...and then I think you'll fix your problem if you do "yum clean expire-cache", then run pirut or "yum update" again. If that doesn't work try: "yum clean all", and then run your normal commands.
If it wasn't obvious, can you run the first 3 commands, and put the output in this bugzilla?
<quote>If it wasn't obvious, can you run the first 3 commands, and put the output in this bugzilla?</quote> The output is: [root@DHS-NISTnet-JSD jdetwile]# yum --version 3.2.19 Installed: rpm-4.4.2.2-7.fc8.i386 at 2007-12-02 03:07 Built : Fedora Project at 2007-11-12 07:25 Committed: Panu Matilainen <pmatilai> at 2007-10-24 22:00 Installed: yum-metadata-parser-1.1.2-1.fc8.i386 at 2007-11-29 02:57 Built : Fedora Project at 2007-08-24 14:14 Committed: Seth Vidal <skvidal at fedoraproject.org> at 2007-08-24 22:00 Installed: yum-3.2.19-3.fc8.noarch at 2008-09-11 12:32 Built : Fedora Project at 2008-09-03 15:19 Committed: Seth Vidal <skvidal at fedoraproject.org> at 2008-09-03 22:00 [root@DHS-NISTnet-JSD jdetwile]# [root@DHS-NISTnet-JSD jdetwile]# [root@DHS-NISTnet-JSD jdetwile]# [root@DHS-NISTnet-JSD jdetwile]# yum repolist repo id repo name status adobe-linux-i386 Adobe Systems Incorporated enabled : 17 atrpms Fedora 8 - i386 - ATrpms enabled : 699 fedora Fedora 8 - i386 enabled : 8,439 fedora-source Fedora 8 - Source enabled : 4,834 freshrpms Fedora Core 8 - i386 - Freshrpms enabled : 156 updates Fedora 8 - i386 - Updates enabled : 1 updates-newkey Fedora 8 - i386 - Updates Newkey enabled : 5,297 updates-source Fedora 8 - Updates Source enabled : 1 repolist: 19,444 [root@DHS-NISTnet-JSD jdetwile]# [root@DHS-NISTnet-JSD jdetwile]# [root@DHS-NISTnet-JSD jdetwile]# ls -l /var/cache/yum total 40 drwxr-xr-x 3 root root 4096 2008-10-07 06:38 adobe-linux-i386 drwxr-xr-x 3 root root 4096 2008-10-07 06:38 atrpms drwxr-xr-x 3 root root 4096 2008-10-07 06:38 fedora drwxr-xr-x 3 root root 4096 2008-10-07 06:38 fedora-source drwxr-xr-x 3 root root 4096 2008-10-07 06:38 freshrpms drwxr-xr-x 3 root root 4096 2007-12-01 19:05 InstallMedia drwxr-xr-x 3 root root 4096 2008-10-07 06:38 updates drwxr-xr-x 3 root root 4096 2008-10-07 06:38 updates-newkey drwxr-xr-x 3 root root 4096 2008-10-07 06:38 updates-source drwxr-xr-x 3 root root 4096 2008-09-12 17:39 updates-testing [root@DHS-NISTnet-JSD jdetwile]#
Ok, everytime I've seen this bug now it's someone using an atrpms repo. It's possible they are doing something weird with multiple packages with the same pkgId, combined with their desire to ship only .xml metadata might produce these kinds of errors. I'd recommend just disabling that repo.
maybe that can help, I had same kind of message doing command line yum upgrade F8 -> F9 Traceback (most recent call last): File "/usr/bin/yum", line 29, in <module> yummain.user_main(sys.argv[1:], exit_code=True) File "/usr/share/yum-cli/yummain.py", line 229, in user_main errcode = main(args) File "/usr/share/yum-cli/yummain.py", line 145, in main (result, resultmsgs) = base.buildTransaction() File "/usr/lib/python2.5/site-packages/yum/__init__.py", line 641, in buildTransaction (rescode, restring) = self.resolveDeps() File "/usr/lib/python2.5/site-packages/yum/depsolve.py", line 696, in resolveDeps for po, dep in self._checkFileRequires(): File "/usr/lib/python2.5/site-packages/yum/depsolve.py", line 931, in _checkFileRequires if not self.tsInfo.getOldProvides(filename) and not self.tsInfo.getNewProvides(filename): File "/usr/lib/python2.5/site-packages/yum/transactioninfo.py", line 414, in getNewProvides for pkg, hits in self.pkgSack.getProvides(name, flag, version).iteritems(): File "/usr/lib/python2.5/site-packages/yum/packageSack.py", line 300, in getProvides return self._computeAggregateDictResult("getProvides", name, flags, version) File "/usr/lib/python2.5/site-packages/yum/packageSack.py", line 470, in _computeAggregateDictResult sackResult = apply(method, args) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 857, in getProvides return self._search("provides", name, flags, version) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 43, in newFunc return func(*args, **kwargs) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 833, in _search for pkg in self.searchFiles(name, strict=True): File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 43, in newFunc return func(*args, **kwargs) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 584, in searchFiles self._sql_pkgKey2po(rep, cur, pkgs) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 468, in _sql_pkgKey2po pkg = self._packageByKey(repo, ob['pkgKey']) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 411, in _packageByKey po = self.pc(repo, cur.fetchone()) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 68, in __init__ self._read_db_obj(db_obj) File "/usr/lib/python2.5/site-packages/yum/sqlitesack.py", line 94, in _read_db_obj setattr(self, item, _share_data(db_obj[item])) TypeError: 'NoneType' object is unsubscriptable disabling repo updates and keeping only repo update-newkey seen to solve the problem, the upgrade is busy
*** Bug 466917 has been marked as a duplicate of this bug. ***
salmon.thierry and Rex Abert ... do you both have the atrpms repo. installed? If not can you paste the output from "yum repolist"?
no atrpms repo for me. this config gives me the problem when I did upgrade + yum --exclude=openoffice.org-base --exclude=openoffice.org-calc --exclude=openoffice.org-draw --exclude=openoffice.org-emailmerge --exclude=openoffice.org-graphicfilter --exclude=openoffice.org-impress --exclude=openoffice.org-javafilter --exclude=openoffice.org-math --exclude=openoffice.org-pyuno --exclude=openoffice.org-writer --exclude=openoffice.org-xsltfilter --exclude=openoffice.org-core --exclude=openoffice.org-headless --exclude libX11 --exclude libX11-devel --disablerepo fedora --enablerepo fedoralocal --disablerepo updates --enablerepo updateslocal --disablerepo fedoraEverything --enablerepo fedoraEverythinglocal --disablerepo updates-newkey --enablerepo updateslocal-newkey repolist repo id repo name status fedoraEverythingloca Fedora 9 - i386 enabled : 9,897 fedoralocal Fedora Core 9 - i386 enabled : 2,071 updateslocal Fedora Core 9 - i386 - Updates enabled : 1 updateslocal-newkey Fedora Core 9 - i386 - Updates Newkey enabled : 4,344 repolist: 16,313 this config gives me no problem when I did upgrade (upgrade still busy) + yum --exclude=openoffice.org-base --exclude=openoffice.org-calc --exclude=openoffice.org-draw --exclude=openoffice.org-emailmerge --exclude=openoffice.org-graphicfilter --exclude=openoffice.org-impress --exclude=openoffice.org-javafilter --exclude=openoffice.org-math --exclude=openoffice.org-pyuno --exclude=openoffice.org-writer --exclude=openoffice.org-xsltfilter --exclude=openoffice.org-core --exclude=openoffice.org-headless --exclude extragear-plasma --disablerepo fedoraEverything --enablerepo fedoraEverythinglocal --disablerepo updates-newkey --enablerepo updateslocal-newkey --enablerepo livnalocal repolist repo id repo name status fedoraEverythingloca Fedora 9 - i386 enabled : 9,897 livnalocal Livna for Fedora Core 9 - i386 - Base enabled : 909 updateslocal-newkey Fedora Core 9 - i386 - Updates Newkey enabled : 4,344 repolist: 15,150 *local repo are only local copy of internet repo for personal reason.
So AIUI, removing these two repos. solves the problem: fedoralocal Fedora Core 9 - i386 enabled : 2,071 updateslocal Fedora Core 9 - i386 - Updates enabled : 1 ...can you tar up the files in /var/cache/yum/fedoralocal and /var/cache/yum/updateslocal (don't need the packages directories etc., just the files). If not can you show what ls -l is in both directories?
Sinds last post, I restart my upgrade process because some missing dependencies, with the new run I added fedoralocal. Transaction test step is now succeeded, it's busy in Running Transaction stop. So removing only repo updateslocal solves the problem for me. updateslocal Fedora Core 9 - i386 - Updates enabled : 1 now ls output ls -l fedoralocal/ updateslocal fedoralocal/: total 33892 -rw-r--r-- 1 root root 0 2008-10-14 17:17 cachecookie -rw-r--r-- 1 root root 1111171 2007-05-27 16:00 comps-f7.xml -rw-r--r-- 1 root root 11815936 2008-10-14 14:32 filelists.sqlite -rw-r--r-- 1 root root 1946449 2007-05-27 16:36 filelists.xml.gz -rw-r--r-- 1 root root 9593856 2007-06-23 20:52 filelists.xml.gz.sqlite drwxr-xr-x 2 root root 32768 2007-06-23 20:55 headers drwxr-xr-x 2 root root 32768 2007-06-30 18:24 packages -rw-r--r-- 1 root root 5867520 2008-10-14 14:18 primary.sqlite -rw-r--r-- 1 root root 631597 2007-05-27 16:36 primary.xml.gz -rw-r--r-- 1 root root 3589120 2007-06-23 20:39 primary.xml.gz.sqlite -rw-r--r-- 1 root root 2442 2008-05-08 03:42 repomd.xml updateslocal: total 46636 -rw-r--r-- 1 root root 0 2008-10-14 14:53 cachecookie -rw-r--r-- 1 root root 1215803 2008-01-07 07:45 comps-f8.xml -rw-r--r-- 1 root root 32998400 2008-07-10 18:23 filelists.sqlite -rw-r--r-- 1 root root 1227691 2007-06-20 21:45 filelists.xml.gz -rw-r--r-- 1 root root 6631424 2007-06-23 20:52 filelists.xml.gz.sqlite drwxr-xr-x 2 root root 8192 2007-06-23 20:55 headers drwxr-xr-x 2 root root 98304 2008-09-30 21:50 packages -rw-r--r-- 1 root root 20480 2008-09-30 21:47 primary.sqlite -rw-r--r-- 1 root root 337187 2007-06-20 21:45 primary.xml.gz -rw-r--r-- 1 root root 5128192 2007-06-23 20:39 primary.xml.gz.sqlite -rw-r--r-- 1 root root 2659 2008-09-10 18:55 repomd.xml I have tgz too, but I'm newbie in bugzilla, where can I upload it ?
Ok, when you do createrepo on your local repos. ... pass the -d option, and I'm 99% sure your problems will go away.
(In reply to comment #8) > salmon.thierry and Rex Abert ... do you both have the atrpms repo. installed? > If not can you paste the output from "yum repolist"? [root@localhost ~]# yum repolist livna | 2.1 kB 00:00 fedora | 2.1 kB 00:00 adobe-linux-i386 | 951 B 00:00 updates-newkey | 2.3 kB 00:00 updates | 2.6 kB 00:00 repo id repo name status adobe-linux-i386 Adobe Systems Incorporated enabled : 17 fedora Fedora 8 - i386 enabled : 8,439 livna Livna for Fedora Core 8 - i386 - Base enabled : 2,084 updates Fedora 8 - i386 - Updates enabled : 1 updates-newkey Fedora 8 - i386 - Updates Newkey enabled : 5,322 repolist: 15,863 [root@localhost ~]#
[root@localhost ~]# ls -l /var/cache/yum/* /var/cache/yum/adobe-linux-i386: total 1084 -rw-r--r-- 1 root root 0 2008-10-15 07:20 cachecookie -rw-r--r-- 1 root root 798720 2008-08-15 11:16 filelists.xml.gz.sqlite drwxr-xr-x 2 root root 4096 2008-10-15 07:25 packages -rw-r--r-- 1 root root 10514 2008-10-14 19:57 primary.xml.gz -rw-r--r-- 1 root root 282624 2008-10-14 21:20 primary.xml.gz.sqlite -rw-r--r-- 1 root root 972 2008-10-14 19:57 repomd.xml /var/cache/yum/fedora: total 67220 -rw-r--r-- 1 root root 0 2008-10-15 07:20 cachecookie -rw-r--r-- 1 root root 1206417 2007-11-02 10:10 Fedora-8-comps.xml -rw-rw-r-- 1 root root 45641728 2008-08-11 15:16 filelists.sqlite -rw-r--r-- 1 root root 2941 2008-10-14 20:20 mirrorlist.txt drwxr-xr-x 2 root root 4096 2008-09-29 11:17 packages -rw-r--r-- 1 root root 21885952 2008-08-11 15:09 primary.sqlite -rw-r--r-- 1 root root 2151 2007-11-02 10:10 repomd.xml /var/cache/yum/livna: total 5336 -rw-r--r-- 1 root root 0 2008-10-15 07:20 cachecookie -rw-r--r-- 1 root root 12207 2008-08-06 01:55 comps.xml -rw-rw-r-- 1 root root 1928192 2008-08-11 15:31 filelists.sqlite drwxr-xr-x 2 root root 4096 2008-09-16 11:08 packages -rw-r--r-- 1 root root 3506176 2008-10-03 09:22 primary.sqlite -rw-r--r-- 1 root root 2142 2008-10-03 08:21 repomd.xml /var/cache/yum/updates: total 35256 -rw-r--r-- 1 root root 0 2008-10-15 07:21 cachecookie -rw-r--r-- 1 root root 1322338 2008-09-08 19:28 comps-f8.xml -rw-rw-r-- 1 root root 34663424 2008-08-12 15:26 filelists.sqlite -rw-r--r-- 1 root root 2034 2008-10-14 18:21 mirrorlist.txt drwxr-xr-x 2 root root 36864 2008-09-16 10:31 packages -rw-r--r-- 1 root root 20480 2008-09-10 20:26 primary.sqlite -rw-r--r-- 1 root root 2659 2008-09-10 10:55 repomd.xml -rw-r--r-- 1 root root 704 2008-09-10 10:55 updateinfo.xml.gz /var/cache/yum/updates-newkey: total 51236 -rw-r--r-- 1 root root 0 2008-10-15 07:20 cachecookie -rw-r--r-- 1 root root 1342354 2008-10-06 23:46 comps-f8.xml -rw-r--r-- 1 root root 35982336 2008-10-14 10:14 filelists.sqlite -rw-r--r-- 1 root root 2187 2008-10-14 19:20 mirrorlist.txt drwxr-xr-x 2 root root 4096 2008-10-10 07:23 packages -rw-r--r-- 1 root root 14439424 2008-10-09 22:21 primary.sqlite -rw-r--r-- 1 root root 2390 2008-10-09 16:51 repomd.xml -rw-r--r-- 1 root root 610691 2008-10-10 04:21 updateinfo.xml.gz [root@localhost ~]#
yum-metadata-parser-1.1.2-9.fc9 has been submitted as an update for Fedora 9. http://admin.fedoraproject.org/updates/yum-metadata-parser-1.1.2-9.fc9
yum-metadata-parser-1.1.2-9.fc9 has been pushed to the Fedora 9 stable repository. If problems still persist, please make note of it in this bug report.
*** Bug 471212 has been marked as a duplicate of this bug. ***
*** Bug 473503 has been marked as a duplicate of this bug. ***
*** Bug 476638 has been marked as a duplicate of this bug. ***