754595 – [abrt] ipython-0.11-3.fc16: sem_wait: Process /usr/bin/python was killed by signal 11 (SIGSEGV)

Bug 754595 - [abrt] ipython-0.11-3.fc16: sem_wait: Process /usr/bin/python was killed by signal 11 (SIGSEGV)

Summary: [abrt] ipython-0.11-3.fc16: sem_wait: Process /usr/bin/python was killed by s...

Keywords:
Status:	CLOSED INSUFFICIENT_DATA
Alias:	None
Product:	Fedora
Classification:	Fedora
Component:	ipython
Sub Component:
Version:	16
Hardware:	x86_64
OS:	Unspecified
Priority:	unspecified
Severity:	unspecified
Target Milestone:	---
Assignee:	Thomas Spura
QA Contact:	Fedora Extras Quality Assurance
Docs Contact:
URL:
Whiteboard:	abrt_hash:02889a0f3b92283a6b74fc76223...
Depends On:
Blocks:
TreeView+	depends on / blocked

Reported:	2011-11-16 22:36 UTC by Marco Nolden
Modified:	2012-03-07 22:10 UTC (History)
CC List:	3 users (show)
Fixed In Version:
Doc Type:	Bug Fix
Doc Text:
Clone Of:
Environment:
Last Closed:	2012-03-07 22:10:04 UTC
Type:	---
Dependent Products:

Attachments	(Terms of Use)
File: maps (21.94 KB, text/plain) 2011-11-16 22:36 UTC, Marco Nolden	no flags	Details
File: backtrace (193.06 KB, text/plain) 2011-11-16 22:36 UTC, Marco Nolden	no flags	Details
View All Add an attachment (proposed patch, testcase, etc.)

Description Marco Nolden 2011-11-16 22:36:38 UTC

libreport version: 2.0.6
abrt_version:   2.0.4.981
backtrace_rating: 4
cmdline:        /usr/bin/python /usr/bin/ipython
comment:        I played around with the sqlite3 module. Stepping through query results, reexecuting queries on existing queries etc.
crash_function: sem_wait
executable:     /usr/bin/python
kernel:         3.1.1-1.fc16.x86_64
reason:         Process /usr/bin/python was killed by signal 11 (SIGSEGV)
time:           Wed Nov 16 23:23:20 2011
uid:            1000
username:       nolden

backtrace:      Text file, 197694 bytes
maps:           Text file, 22462 bytes

build_ids:
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:d297e23a32bdb33da22f41110f1bc21d971bcabb
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:376567a97a463859c28334ed8bf71262183298c2
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:bfe04e2d3d2ea47aea7f060d65ea0c9554f3827d
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:56d0d755b880afdd9ebf2c8c707282384fed90fd
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:679ab828fc91ca109c403955d8ada8068b4b6dcd
:3cbc639da8b05f5cd87202ff77c5c335313d3276
:61ac3f383cec542ca2371917cef83b9a0648af70
:e21d62a3622c3edb824299d83be75df8fdddbe53
:b67d01f9230119a215e7151dc3aa43428b886c8f

dso_list:
:/usr/lib64/python2.7/lib-dynload/itertoolsmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/stropmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libm-2.14.90.so glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/usr/lib64/python2.7/lib-dynload/_socketmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/operator.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libkeyutils.so.1.4 keyutils-libs-1.5.2-1.fc16.x86_64 (Fedora Project) 1317262756
:/usr/lib64/python2.7/lib-dynload/grpmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/_collectionsmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/arraymodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libresolv-2.14.90.so glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/usr/lib64/libffi.so.5.0.10 libffi-3.0.10-1.fc16.x86_64 (Fedora Project) 1320256185
:/lib64/libgssapi_krb5.so.2.2 krb5-libs-1.9.1-18.fc16.x86_64 (Fedora Project) 1320256200
:/usr/lib64/python2.7/lib-dynload/_io.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libreadline.so.6.2 readline-6.2-2.fc16.x86_64 (Fedora Project) 1317262753
:/usr/lib64/python2.7/lib-dynload/zlibmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/resource.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/readline.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/bin/python python-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libpthread-2.14.90.so glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/lib64/libexpat.so.1.5.2 expat-2.0.1-11.fc15.x86_64 (Fedora Project) 1317262754
:/usr/lib64/python2.7/lib-dynload/_randommodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libcrypto.so.1.0.0e openssl-1.0.0e-1.fc16.x86_64 (Fedora Project) 1317262770
:/usr/lib64/python2.7/lib-dynload/_functoolsmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libkrb5.so.3.3 krb5-libs-1.9.1-18.fc16.x86_64 (Fedora Project) 1320256200
:/usr/lib64/python2.7/lib-dynload/_heapq.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/pyexpat.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/_struct.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/binascii.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/_ssl.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/libsqlite3.so.0.8.6 sqlite-3.7.7.1-1.fc16.x86_64 (Fedora Project) 1317262753
:/usr/lib64/python2.7/lib-dynload/_lsprof.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libdl-2.14.90.so glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/lib64/libkrb5support.so.0.1 krb5-libs-1.9.1-18.fc16.x86_64 (Fedora Project) 1320256200
:/usr/lib64/python2.7/lib-dynload/_localemodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/libssl.so.1.0.0e openssl-1.0.0e-1.fc16.x86_64 (Fedora Project) 1317262770
:/lib64/libc-2.14.90.so glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/usr/lib64/python2.7/lib-dynload/selectmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/timemodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/_ctypes.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/datetime.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/libpython2.7.so.1.0 python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/_sqlite3.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libz.so.1.2.5 zlib-1.2.5-5.fc16.x86_64 (Fedora Project) 1321448156
:/lib64/ld-2.14.90.so glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/lib64/libk5crypto.so.3.1 krb5-libs-1.9.1-18.fc16.x86_64 (Fedora Project) 1320256200
:/usr/lib64/python2.7/lib-dynload/termios.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libtinfo.so.5.9 ncurses-libs-5.9-2.20110716.fc16.x86_64 (Fedora Project) 1317262753
:/usr/lib/locale/locale-archive glibc-common-2.14.90-14.x86_64 (Fedora Project) 1320256177
:/lib64/libutil-2.14.90.so glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/usr/lib64/python2.7/lib-dynload/_curses.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/fcntlmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/cPickle.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libcom_err.so.2.1 libcom_err-1.41.14-2.fc15.x86_64 (Fedora Project) 1317262753
:/usr/lib64/python2.7/lib-dynload/cStringIO.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/_hashlib.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/lib64/libncursesw.so.5.9 ncurses-libs-5.9-2.20110716.fc16.x86_64 (Fedora Project) 1317262753
:/usr/lib64/gconv/gconv-modules.cache glibc-2.14.90-14.x86_64 (Fedora Project) 1320256183
:/lib64/libselinux.so.1 libselinux-2.1.6-4.fc16.x86_64 (Fedora Project) 1320256184
:/usr/lib64/python2.7/lib-dynload/math.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198
:/usr/lib64/python2.7/lib-dynload/_bisectmodule.so python-libs-2.7.2-5.2.fc16.x86_64 (Fedora Project) 1320256198

environ:
:XDG_VTNR=1
:XDG_SESSION_ID=2
:HOSTNAME=mbi-nb09.inet.dkfz-heidelberg.de
:IMSETTINGS_INTEGRATE_DESKTOP=yes
:GPG_AGENT_INFO=/tmp/keyring-NiS79D/gpg:0:1
:TERM=xterm
:SHELL=/bin/bash
:HISTSIZE=1000
:XDG_SESSION_COOKIE=520130e2a032ff6c84b488ae00000005-1321469740.496817-1881574055
:GJS_DEBUG_OUTPUT=stderr
:WINDOWID=29364793
:GNOME_KEYRING_CONTROL=/tmp/keyring-NiS79D
:'GJS_DEBUG_TOPICS=JS ERROR;JS LOG'
:IMSETTINGS_MODULE=none
:USER=nolden
:LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:*.pdf=00;33:*.ps=00;33:*.ps.gz=00;33:*.txt=00;33:*.patch=00;33:*.diff=00;33:*.log=00;33:*.tex=00;33:*.xls=00;33:*.xlsx=00;33:*.ppt=00;33:*.pptx=00;33:*.rtf=00;33:*.doc=00;33:*.docx=00;33:*.odt=00;33:*.ods=00;33:*.odp=00;33:*.xml=00;33:*.epub=00;33:*.abw=00;33:*.html=00;33:*.wpd=00;33:
:SSH_AUTH_SOCK=/tmp/keyring-NiS79D/ssh
:SESSION_MANAGER=local/unix:@/tmp/.ICE-unix/1340,unix/unix:/tmp/.ICE-unix/1340
:USERNAME=nolden
:PATH=/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/nolden/.local/bin:/home/nolden/bin
:MAIL=/var/spool/mail/nolden
:DESKTOP_SESSION=gnome
:QT_IM_MODULE=xim
:PWD=/home/nolden
:XMODIFIERS=@im=none
:GNOME_KEYRING_PID=1333
:LANG=en_US.UTF-8
:GDMSESSION=gnome
:HISTCONTROL=ignoredups
:XDG_SEAT=seat0
:HOME=/home/nolden
:SHLVL=2
:GNOME_DESKTOP_SESSION_ID=this-is-deprecated
:LOGNAME=nolden
:DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-kyT1HrBi5O,guid=26b776ec8f170cc28790277200000013
:'LESSOPEN=||/usr/bin/lesspipe.sh %s'
:WINDOWPATH=1
:XDG_RUNTIME_DIR=/run/user/nolden
:DISPLAY=:0
:COLORTERM=gnome-terminal
:XAUTHORITY=/var/run/gdm/auth-for-nolden-T6b4Wx/database
:_=/usr/bin/ipython

var_log_messages:
:Nov 16 13:56:39 mbi-nb09 yum[6432]: Updated: python-setuptools-0.6.24-1.fc16.noarch
:Nov 16 23:04:45 mbi-nb09 yum[3457]: Installed: python-simplegeneric-0.7-2.fc15.noarch
:Nov 16 23:04:46 mbi-nb09 yum[3457]: Installed: python-zmq-2.1.9-1.fc16.x86_64
:Nov 16 23:04:46 mbi-nb09 yum[3457]: Installed: python-mglob-0.4-3.fc15.noarch
:Nov 16 23:04:47 mbi-nb09 yum[3457]: Installed: python-nose-1.1.2-1.fc16.noarch
:Nov 16 23:04:50 mbi-nb09 yum[3457]: Installed: python-dateutil-1.5-3.fc16.noarch
:Nov 16 23:04:53 mbi-nb09 yum[3457]: Installed: python-matplotlib-1.0.1-12.fc16.x86_64
:Nov 16 23:04:55 mbi-nb09 yum[3457]: Installed: ipython-0.11-3.fc16.noarch
:Nov 16 23:23:20 mbi-nb09 kernel: [ 4272.626053] ipython[3594]: segfault at 27a95d0 ip 00000034f6b4f2c2 sp 00007fff142b9c58 error 6 in libc-2.14.90.so[34f6a00000+1aa000]
:Nov 16 23:23:21 mbi-nb09 abrt[3606]: saved core dump of pid 3594 (/usr/bin/python) to /var/spool/abrt/ccpp-2011-11-16-23:23:20-3594 (22724608 bytes)

Comment 1 Marco Nolden 2011-11-16 22:36:42 UTC

Created attachment 534118 [details]
File: maps

Comment 2 Marco Nolden 2011-11-16 22:36:48 UTC

Created attachment 534119 [details]
File: backtrace

Comment 3 Thomas Spura 2011-11-20 23:26:09 UTC

Thanks for filing this bug.

It looks like this is a bug in readline and not in sqlite3 (but could also be possible). Could also be in glibc...

Can you provide maybe a reproducer?

Try to do the same again, what you where doing and try some TAB hitting (which will tricker readline) and hopefully we can track this down...

Comment 4 Marco Nolden 2011-11-25 10:19:07 UTC

Sorry, no luck on reproducing this so far.

Comment 5 Thomas Spura 2012-03-07 22:10:04 UTC

(In reply to comment #4)
> Sorry, no luck on reproducing this so far.

Me neither... :(

Sorry, I'll close this as INSUFFICIENT DATA, feel free to reopen/open a new bug, when there is a proper reproducer.

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